Main Team:
Froggeh (Greninja) Get it as a Starter
Beauty (Gardevoir)Corrupted Pokeball in the Underground Railnet Even though I got mine before it got put there.
Legend (Arcanine) Rescue all of the policemen in the Beryl and Jasper Wards and you will be awarded a dead policeman's growlithe \(^-^)/
Jolty (Jolteon) Find Eevee in a Chrysolia cave and it gotta be a windy day? And you have to follow the way the train tracks are pointing.
Batman (Crobat) Zubat used to be in the Underground Railnet but I forgot where it got moved to...
ChiChi (Cinccino) Chrysolia Forest
In the Box:
Bruce (Lucario) Get Riolu egg in Ametrine City by doing an event.
Clummzzy(Ambipom) I think I found it in the grass outside of Ametrine city.
Charlotte (Galvantula) North Adventurine Woods
Sapphire (Chandelure) Get a litwick at the summoning circle where Luna was chained. You have to have soul candle of course.
DewDrop (Roserade) Get budew when it is dancing ontop of the Lapis ward wall near the Flower Shop (gonna need a Rose Incense which you get from a Doxy in Peridot).
Angelica (Absol) Get it by getting an Ill-fated Doll and go to Route 4 and there should be a waterfall. Hop on the stones and Absol should appear.
Hoodlum (Scrafty) Get it by getting a dull key from the Underground Railnet and then going to the slums to unlock a door to go further into the slums.
BoomBox (Exploud) Get it by buying it from the Pokemon Dealer in 7th Street.
Supa-Hero!! (Gallade) Male Ralts in Corrupted Pokeball or breed your female Ralts with a ditto.
Emperor (Empoleon) Give a man in 7th street a "Rare Candy" and he will give you piplup. To get this you gotta mine a rock and then use the blast powder to mine it again and behind the rock is the "candy". This rock is located to the right when you go to the Arceus dungeon thingy.
Senora (Ludicolo) Get it by going to the Coral Ward when it is raining and you gotta have pokesnax with you to get it.
Mako (Sawk) Route 2
Blitz (Typhlosion) 7th Street Dealer
OmNom~ (Rotom-W) Get Rotom by getting the Yuyeyu key and then you go to shade's gym and open the door in the back and THEN you kill off all the Electrodes and THEN once you have Rotom go to Ametrine city and go in a house with a computer in it and no one else. That is where you can change Rotom's form.
Venu (Venusaur) Got replaced with Chikorita at Azurine Island event. Ignore this.
V1RU2 (Porygon-Z) Get Porygon at the Glitch World or get a Data chip and get a porygon from the computer in the Onyx Trainer School, then evolve it with the linkstone (holding upgrade) and evolve it agian (holding dubious disc which you can get from the Glitch World)
Neptune (Kingdra) Catch a Horsea in Ametrine Mountain and evolve it when it becomes a Seadra with a Linkstone whilst holding a Dragon Scale.
Ceros (Heracross) Complete the Adventurine Forest Event involving Honey, Log smashing, and Web cutting.
Paul (Electivire) I got mine on top of the Beryl Building, but it got replaced by Helioptile, but you can still get an Elekid in a house in Calcenon City. Basically, you gotta evolve Electabuzz with the Linkston holding the Electizer and then BOOM. But you gotta have the Electrizer to get Elekid. Oops.
DoomFish (Sharpedo) Get it as a Carvanha for joining the Aqua Gang and you can also catch it in the water in the Aqua Gang territory.
BTW..... When I get bored I catch, breed, and EV train pokemon...which is why there are so many in my PC
Oops