Typhlosion- I named him Dart because Dragoon was the first PS game I owned as a kid and I always name Cyndaquill after the game's main protagonist.
Shinryu- Gyarados, he is named after the hidden boss in Final Fantasy V. Shinryu is the dragon god of destruction and a fitting name for a Gyarados.
Kragma- Magmar named after my favorite boss from the legend of Zelda Spirit Tracks
Terra- I named Gardevoir after Terra from Final Fantasy VI, even though Gardevoirs have nothing to do with Earth
Manny- Mamoswine, he a mammoth and I remember Ice Age from my childhood and that's what Sid always called him.
Auxiliary- Exploud, Auxiliary is a cool name and it fits Exploud well.