Something is still not right. When I place that file under [username]>Saved Games>Pokemon Reborn the wrong file is being loaded into the game. When that location is empty, there is no save loaded. When it has nothing but that file, it loads an older file I have at Devon Corp. Either I posted the wrong file or my game is reading the older file for some reason. The game should have 11 badges, Alice as the character, and a squad with non-shiny Metagross.
Here is the backup file which should be correct but has the same issue described before.
579 - Kaiya - 29h 50m - 11 badges.